Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_38965 38965 |
scaffold_55 | 407707 | 408027 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_38965 38965 PAC:15419010 |
Low | No | 321 | Get ORF Coding potential... Type: noncoding Potential: -0.207 Folding energies... MFEI: -26.822 AMFE: -0.509 GC content %: 52.648 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_38965 | SwissProt | 2015-06-01 | Q84V39 | 2.0e-16 |