Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_403247 403247 |
scaffold_1 | 747657 | 748311 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_403247 403247 PAC:15405668 |
Low | No | 336 | Get ORF Coding potential... Type: noncoding Potential: -0.267 Folding energies... MFEI: -28.720 AMFE: -0.639 GC content %: 44.940 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_403247 | SwissProt | 2015-06-01 | Q9M8D3 | 7.0e-11 |