Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_412217 412217 |
scaffold_17 | 956443 | 957400 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_412217 412217 PAC:15409936 |
Low | No | 303 | Get ORF Coding potential... Type: noncoding Potential: -0.629 Folding energies... MFEI: -25.578 AMFE: -0.583 GC content %: 43.894 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_412217 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-2_SMo |