Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400032250 PGSC0003DMG400032250 |
chr09 | 45717354 | 45718911 | Phytozome | v3.4 | Solanum_tuberosum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400082080 PGSC0003DMT400082080 PAC:24401575 |
Low | No | 648 | Get ORF Coding potential... Type: noncoding Potential: -0.119 Folding energies... MFEI: -23.657 AMFE: -0.650 GC content %: 36.420 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400082080 | SwissProt | 2015-06-01 | Q9ZQI8 | 7.0e-15 |