Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4DL_193C0F8F9 Traes_4DL_193C0F8F9 |
ta_iwgsc_4dl_v3_14348262 | 28 | 1574 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4DL_193C0F8F9.1 Traes_4DL_193C0F8F9.1 PAC:31982463 |
Low | No | 650 | Get ORF Coding potential... Type: noncoding Potential: -0.840 Folding energies... MFEI: -31.123 AMFE: -0.787 GC content %: 39.538 | |
Taestivum_Traes_4DL_193C0F8F9.2 Traes_4DL_193C0F8F9.2 PAC:31982464 |
High | No | 756 | Get ORF Coding potential... Type: noncoding Potential: -0.888 Folding energies... MFEI: -26.402 AMFE: -0.638 GC content %: 41.402 | |
Taestivum_Traes_4DL_193C0F8F9.3 Traes_4DL_193C0F8F9.3 PAC:31982465 |
Low | No | 289 | Get ORF Coding potential... Type: noncoding Potential: -0.782 Folding energies... MFEI: -28.097 AMFE: -0.629 GC content %: 44.637 | |
Taestivum_Traes_4DL_193C0F8F9.4 Traes_4DL_193C0F8F9.4 PAC:31982466 |
Low | No | 596 | Get ORF Coding potential... Type: noncoding Potential: -1.144 Folding energies... MFEI: -25.252 AMFE: -0.622 GC content %: 40.604 | |
Taestivum_Traes_4DL_193C0F8F9.5 Traes_4DL_193C0F8F9.5 PAC:31982467 |
High | No | 610 | Get ORF Coding potential... Type: noncoding Potential: -1.090 Folding energies... MFEI: -31.098 AMFE: -0.800 GC content %: 38.852 | |
Taestivum_Traes_4DL_193C0F8F9.6 Traes_4DL_193C0F8F9.6 PAC:31982468 |
High | No | 546 | Get ORF Coding potential... Type: noncoding Potential: -0.958 Folding energies... MFEI: -30.934 AMFE: -0.800 GC content %: 38.645 |