Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01023086001 GSVIVG01023086001 |
chr12 | 15519499 | 15523443 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01023086001 GSVIVT01023086001 PAC:17831677 |
Low | No | 374 | Get ORF Coding potential... Type: noncoding Potential: -0.520 Folding energies... MFEI: -22.086 AMFE: -0.603 GC content %: 36.631 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01023086001 | SwissProt | 2015-06-01 | O35016 | 1.0e-4 |