Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Acoerulea_Aquca_035_00231 Aquca_035_00231 |
scaffold_35 | 2146115 | 2146756 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Acoerulea_Aquca_035_00231.1 Aquca_035_00231.1 PAC:22061039 |
Low | No | 237 | Get ORF Coding potential... Type: noncoding Potential: -0.506 Folding energies... MFEI: -23.165 AMFE: -0.538 GC content %: 43.038 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Acoerulea_Aquca_035_00231.1 | SwissProt | 2015-06-01 | Q9XEA8 | 9.0e-8 |