Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Acomosus_Aco000533 Aco000533 |
LG12 | 1224360 | 1224704 | Phytozome | v3 | Ananas_comosus | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Acomosus_Aco000533.1 Aco000533.1 PAC:33042320 |
Low | Yes | 345 | Get ORF Coding potential... Type: noncoding Potential: -0.927 Folding energies... MFEI: -52.145 AMFE: -0.692 GC content %: 75.362 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Acomosus_Aco000533.1 | SwissProt | 2015-06-01 | Q6NLC8 | 2.0e-10 |