Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Acomosus_Aco000979 Aco000979 |
LG02 | 15218869 | 15219954 | Phytozome | v3 | Ananas_comosus | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Acomosus_Aco000979.1 Aco000979.1 PAC:33036562 |
Low | No | 826 | Get ORF Coding potential... Type: noncoding Potential: -0.568 Folding energies... MFEI: -27.470 AMFE: -0.646 GC content %: 42.494 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Acomosus_Aco000979.1 | SwissProt | 2015-06-01 | Q9LFR3 | 3.0e-18 |