Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.0897s0002 Araha.0897s0002 |
Scaffold897 | 4052 | 5529 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.0897s0002.1 Araha.0897s0002.1 PAC:28854719 |
High | No | 706 | Get ORF Coding potential... Type: noncoding Potential: -1.059 Folding energies... MFEI: -22.238 AMFE: -0.616 GC content %: 36.119 | |
Ahalleri_Araha.0897s0002.2 Araha.0897s0002.2 PAC:28854716 |
High | No | 676 | Get ORF Coding potential... Type: noncoding Potential: -1.054 Folding energies... MFEI: -21.553 AMFE: -0.600 GC content %: 35.947 | |
Ahalleri_Araha.0897s0002.3 Araha.0897s0002.3 PAC:28854717 |
High | No | 683 | Get ORF Coding potential... Type: noncoding Potential: -1.055 Folding energies... MFEI: -21.142 AMFE: -0.589 GC content %: 35.871 | |
Ahalleri_Araha.0897s0002.4 Araha.0897s0002.4 PAC:28854718 |
High | No | 699 | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -22.718 AMFE: -0.628 GC content %: 36.195 |