Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.2490s0015 Araha.2490s0015 |
Scaffold2490 | 79397 | 80172 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.2490s0015.1 Araha.2490s0015.1 PAC:28845299 |
High | No | 490 | Get ORF Coding potential... Type: noncoding Potential: -0.746 Folding energies... MFEI: -22.918 AMFE: -0.527 GC content %: 43.469 | |
Ahalleri_Araha.2490s0015.2 Araha.2490s0015.2 PAC:28845298 |
High | No | 440 | Get ORF Coding potential... Type: noncoding Potential: -0.715 Folding energies... MFEI: -24.409 AMFE: -0.548 GC content %: 44.545 |