Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.42290s0001 Araha.42290s0001 |
Scaffold42290 | 964 | 4015 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.42290s0001.1 Araha.42290s0001.1 PAC:28836612 |
High | No | 850 | Get ORF Coding potential... Type: noncoding Potential: -0.993 Folding energies... MFEI: -22.259 AMFE: -0.595 GC content %: 37.412 | |
Ahalleri_Araha.42290s0001.2 Araha.42290s0001.2 PAC:28836613 |
High | No | 782 | Get ORF Coding potential... Type: noncoding Potential: -0.975 Folding energies... MFEI: -21.573 AMFE: -0.576 GC content %: 37.468 |