Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.5498s0006 Araha.5498s0006 |
Scaffold5498 | 18286 | 19014 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.5498s0006.1 Araha.5498s0006.1 PAC:28844982 |
High | No | 628 | Get ORF Coding potential... Type: noncoding Potential: -0.803 Folding energies... MFEI: -23.806 AMFE: -0.623 GC content %: 38.217 | |
Ahalleri_Araha.5498s0006.2 Araha.5498s0006.2 PAC:28844983 |
High | No | 625 | Get ORF Coding potential... Type: noncoding Potential: -0.804 Folding energies... MFEI: -24.096 AMFE: -0.633 GC content %: 38.080 |