Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ahalleri_Araha.8557s0003 Araha.8557s0003 |
Scaffold8557 | 14559 | 16367 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ahalleri_Araha.8557s0003.1 Araha.8557s0003.1 PAC:28862144 |
Low | No | 1105 | Get ORF Coding potential... Type: noncoding Potential: -0.356 Folding energies... MFEI: -24.606 AMFE: -0.631 GC content %: 39.005 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Ahalleri_Araha.8557s0003.1 | SwissProt | 2015-06-01 | Q9FPT1 | 7.0e-9 |