Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_484136 484136 |
scaffold_5 | 746925 | 752159 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_484136 484136 PAC:16055184 |
Low | No | 473 | Get ORF Coding potential... Type: noncoding Potential: -0.278 Folding energies... MFEI: -23.425 AMFE: -0.549 GC content %: 42.706 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_484136 | SwissProt | 2015-06-01 | Q9ZUL7 | 2.0e-29 |