Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_495398 495398 |
scaffold_8 | 15595753 | 15596366 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_495398 495398 PAC:16058854 |
Low | No | 491 | Get ORF Coding potential... Type: noncoding Potential: -0.449 Folding energies... MFEI: -23.585 AMFE: -0.623 GC content %: 37.882 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_495398 | SwissProt | 2015-06-01 | Q9FK16 | 2.0e-21 |