Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_888630 888630 |
scaffold_7 | 2803993 | 2804315 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_888630 888630 PAC:16057771 |
Low | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -0.893 Folding energies... MFEI: -18.560 AMFE: -0.501 GC content %: 37.037 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_888630 | SwissProt | 2015-06-01 | Q9STF1 | 3.0e-9 |