Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_905975 905975 |
scaffold_3 | 15074241 | 15074888 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_905975 905975 PAC:16055229 |
Low | No | 210 | Get ORF Coding potential... Type: noncoding Potential: -0.380 Folding energies... MFEI: -26.333 AMFE: -0.553 GC content %: 47.619 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_905975 | SwissProt | 2015-06-01 | Q8RXA7 | 8.0e-19 |