Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_920027 920027 |
scaffold_1 | 4808562 | 4808787 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_920027 920027 PAC:16034103 |
Low | No | 226 | Get ORF Coding potential... Type: noncoding Potential: -0.679 Folding energies... MFEI: -23.540 AMFE: -0.591 GC content %: 39.823 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_920027 | SwissProt | 2015-06-01 | Q9SHE7 | 5.0e-9 |