Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_924947 924947 |
scaffold_2 | 2818035 | 2818347 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_924947 924947 PAC:16042777 |
Low | No | 313 | Get ORF Coding potential... Type: noncoding Potential: -0.199 Folding energies... MFEI: -18.722 AMFE: -0.480 GC content %: 38.978 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_924947 | SwissProt | 2015-06-01 | P82627 | 5.0e-57 |