Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_925268 925268 |
scaffold_2 | 5023362 | 5023666 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_925268 925268 PAC:16064426 |
Low | No | 305 | Get ORF Coding potential... Type: noncoding Potential: -0.530 Folding energies... MFEI: -27.410 AMFE: -0.573 GC content %: 47.869 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_925268 | SwissProt | 2015-06-01 | Q9FVS2 | 2.0e-14 |