Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Alyrata_930729 930729 |
scaffold_3 | 13148395 | 13148639 | Phytozome | v1.0 | Arabidopsis_lyrata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Alyrata_930729 930729 PAC:16034947 |
Low | No | 245 | Get ORF Coding potential... Type: noncoding Potential: -0.706 Folding energies... MFEI: -19.510 AMFE: -0.488 GC content %: 40.000 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Alyrata_930729 | SwissProt | 2015-06-01 | P17841 | 8.0e-9 |