Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT1G06148 AT1G06148 |
Chr1 | 1874885 | 1877528 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT1G06148.1 AT1G06148.1 PAC:19654765 |
High | No | 1602 | Get ORF Coding potential... Type: noncoding Potential: -1.332 Folding energies... MFEI: -23.146 AMFE: -0.698 GC content %: 33.146 | |
Athaliana_AT1G06148.2 AT1G06148.2 PAC:19654764 |
High | No | 1046 | Get ORF Coding potential... Type: noncoding Potential: -1.121 Folding energies... MFEI: -22.495 AMFE: -0.567 GC content %: 39.675 |