Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT1G27921 AT1G27921 |
Chr1 | 9726623 | 9730451 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT1G27921.1 AT1G27921.1 |
High | No | 998 | Get ORF Coding potential... Type: noncoding Potential: -1.334 Folding energies... MFEI: -24.038 AMFE: -0.610 GC content %: 39.378 | |
Athaliana_AT1G27921.2 AT1G27921.2 |
High | No | 471 | Get ORF Coding potential... Type: noncoding Potential: -1.275 Folding energies... MFEI: -23.312 AMFE: -0.566 GC content %: 41.188 |