Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT1G29785 AT1G29785 |
Chr1 | 10427613 | 10429133 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT1G29785.1 AT1G29785.1 |
High | No | 625 | Get ORF Coding potential... Type: noncoding Potential: -0.890 Folding energies... MFEI: -23.776 AMFE: -0.592 GC content %: 40.160 | |
Athaliana_AT1G29785.2 AT1G29785.2 |
High | No | 611 | Get ORF Coding potential... Type: noncoding Potential: -0.884 Folding energies... MFEI: -23.126 AMFE: -0.548 GC content %: 42.225 |