Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT2G29125 AT2G29125 |
Chr2 | 12523342 | 12524109 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT2G29125.1 AT2G29125.1 PAC:19638840 |
Low | Yes | 768 | Get ORF Coding potential... Type: noncoding Potential: -0.394 Folding energies... MFEI: -23.151 AMFE: -0.642 GC content %: 36.068 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT2G29125.1 | Rfam | 11.0 | mir-598 | 0.0014 |