Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT2G46685 AT2G46685 |
Chr2 | 19175984 | 19177069 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT2G46685.1 AT2G46685.1 |
Low | Yes | 1086 | Get ORF Coding potential... Type: noncoding Potential: -1.138 Folding energies... MFEI: -25.055 AMFE: -0.728 GC content %: 34.438 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT2G46685.1 | Rfam | 11.0 | mir-166 | 2.0e-22 |