Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT3G31330 AT3G31330 |
Chr3 | 12697412 | 12697778 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT3G31330.1 AT3G31330.1 |
Low | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -0.551 Folding energies... MFEI: -24.156 AMFE: -0.593 GC content %: 40.740 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT3G31330.1 | RepBase (RepeatMasker) | 2014-01-31 | Athila4C_I-int | |
Athaliana_AT3G31330.1 | NONCODE | 3 | NONATHT002064 |