Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT3G41345 AT3G41345 |
Chr3 | 14171525 | 14172161 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT3G41345.1 AT3G41345.1 |
Low | No | 637 | Get ORF Coding potential... Type: noncoding Potential: -0.894 Folding energies... MFEI: -30.204 AMFE: -0.663 GC content %: 45.525 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT3G41345.1 | RepBase (RepeatMasker) | 2014-01-31 | ATENSPM5 | |
Athaliana_AT3G41345.1 | NONCODE | 3 | NONATHT002165 |