Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT3G42380 AT3G42380 |
Chr3 | 14503610 | 14503917 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT3G42380.1 AT3G42380.1 PAC:19659103 |
Low | No | 234 | Get ORF Coding potential... Type: noncoding Potential: -1.012 Folding energies... MFEI: -33.932 AMFE: -0.635 GC content %: 53.419 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT3G42380.1 | RepBase (RepeatMasker) | 2014-01-31 | ATGP10_I-int |