Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT4G27415 AT4G27415 |
Chr4 | 13710548 | 13711050 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT4G27415.1 AT4G27415.1 PAC:19644047 |
High | No | 243 | Get ORF Coding potential... Type: noncoding Potential: -1.245 Folding energies... MFEI: -18.519 AMFE: -0.556 GC content %: 33.333 | |
Athaliana_AT4G27415.2 AT4G27415.2 PAC:19644048 |
High | No | 287 | Get ORF Coding potential... Type: noncoding Potential: -1.125 Folding energies... MFEI: -15.226 AMFE: -0.527 GC content %: 28.920 |