Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT4G29735 AT4G29735 |
Chr4 | 14562639 | 14564378 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT4G29735.1 AT4G29735.1 PAC:19646201 |
Low | No | 655 | Get ORF Coding potential... Type: noncoding Potential: -1.031 Folding energies... MFEI: -25.344 AMFE: -0.654 GC content %: 38.779 | |
Athaliana_AT4G29735.2 AT4G29735.2 PAC:19646200 |
High | No | 721 | Get ORF Coding potential... Type: noncoding Potential: -1.052 Folding energies... MFEI: -25.187 AMFE: -0.651 GC content %: 38.696 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT4G29735.1 | SwissProt | 2015-06-01 | Q6DDB3 | 4.0e-7 |