Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G03440 AT5G03440 |
Chr5 | 856872 | 858428 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G03440.1 AT5G03440.1 PAC:19672697 |
High | No | 688 | Get ORF Coding potential... Type: noncoding Potential: -0.459 Folding energies... MFEI: -24.331 AMFE: -0.611 GC content %: 39.826 | |
Athaliana_AT5G03440.2 AT5G03440.2 PAC:19672698 |
High | No | 802 | Get ORF Coding potential... Type: noncoding Potential: -0.501 Folding energies... MFEI: -25.948 AMFE: -0.654 GC content %: 39.651 |