Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G15320 AT5G15320 |
Chr5 | 4977535 | 4978894 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G15320.1 AT5G15320.1 PAC:19665904 |
High | No | 507 | Get ORF Coding potential... Type: noncoding Potential: -0.942 Folding energies... MFEI: -25.838 AMFE: -0.609 GC content %: 42.406 | |
Athaliana_AT5G15320.2 AT5G15320.2 PAC:19665905 |
High | No | 487 | Get ORF Coding potential... Type: noncoding Potential: -0.950 Folding energies... MFEI: -25.749 AMFE: -0.603 GC content %: 42.710 |