Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G18255 AT5G18255 |
Chr5 | 6035611 | 6037633 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G18255.2 AT5G18255.2 |
High | No | 1885 | Get ORF Coding potential... Type: noncoding Potential: -0.987 Folding energies... MFEI: -28.340 AMFE: -0.676 GC content %: 41.909 | |
Athaliana_AT5G18255.3 AT5G18255.3 |
High | No | 1395 | Get ORF Coding potential... Type: noncoding Potential: -0.781 Folding energies... MFEI: -29.584 AMFE: -0.665 GC content %: 44.516 |