Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G28130 AT5G28130 |
Chr5 | 10114433 | 10114780 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G28130.1 AT5G28130.1 |
Low | No | 348 | Get ORF Coding potential... Type: noncoding Potential: -1.029 Folding energies... MFEI: -26.839 AMFE: -0.531 GC content %: 50.574 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT5G28130.1 | RepBase (RepeatMasker) | 2014-01-31 | Atlantys2_I-int |