Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G28913 AT5G28913 |
Chr5 | 10933823 | 10934730 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G28913.1 AT5G28913.1 |
Low | No | 908 | Get ORF Coding potential... Type: noncoding Potential: -1.278 Folding energies... MFEI: -30.870 AMFE: -0.677 GC content %: 45.594 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT5G28913.1 | RepBase (RepeatMasker) | 2014-01-31 | Sadhu4-1 | |
Athaliana_AT5G28913.1 | NONCODE | 3 | NONATHT003307 |