Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G29029 AT5G29029 |
Chr5 | 11062524 | 11063981 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G29029.1 AT5G29029.1 |
Low | No | 1458 | Get ORF Coding potential... Type: noncoding Potential: -1.063 Folding energies... MFEI: -23.882 AMFE: -0.695 GC content %: 34.362 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT5G29029.1 | RepBase (RepeatMasker) | 2014-01-31 | Copia-7_BRa-I | |
Athaliana_AT5G29029.1 | NONCODE | 3 | NONATHT003314 |