Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT5G57735 AT5G57735 |
Chr5 | 23394005 | 23394500 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT5G57735.1 AT5G57735.1 |
Low | Yes | 496 | Get ORF Coding potential... Type: noncoding Potential: -1.163 Folding energies... MFEI: -19.980 AMFE: -0.652 GC content %: 30.645 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Athaliana_AT5G57735.1 | Rfam | 11.0 | mir-598 | 0.0034 |