Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi1g00910 Bradi1g00910 |
Bd1 | 637937 | 639167 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi1g00910.1 Bradi1g00910.1 PAC:32793574 |
High | No | 1098 | Get ORF Coding potential... Type: noncoding Potential: -0.704 Folding energies... MFEI: -30.319 AMFE: -0.615 GC content %: 49.271 | |
Bdistachyon_Bradi1g00910.2 Bradi1g00910.2 PAC:32793575 |
High | No | 680 | Get ORF Coding potential... Type: noncoding Potential: -0.674 Folding energies... MFEI: -32.868 AMFE: -0.614 GC content %: 53.529 |