Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi2g31737 Bradi2g31737 |
Bd2 | 31431119 | 31439410 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi2g31737.2 Bradi2g31737.2 PAC:32780259 |
High | No | 640 | Get ORF Coding potential... Type: noncoding Potential: -1.041 Folding energies... MFEI: -30.625 AMFE: -0.594 GC content %: 51.562 | |
Bdistachyon_Bradi2g31737.3 Bradi2g31737.3 PAC:32780260 |
High | No | 555 | Get ORF Coding potential... Type: noncoding Potential: -1.024 Folding energies... MFEI: -31.459 AMFE: -0.584 GC content %: 53.874 | |
Bdistachyon_Bradi2g31737.4 Bradi2g31737.4 PAC:32780261 |
High | No | 348 | Get ORF Coding potential... Type: noncoding Potential: -0.986 Folding energies... MFEI: -36.695 AMFE: -0.580 GC content %: 63.218 |