Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi3g18762 Bradi3g18762 |
Bd3 | 17385618 | 17390991 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi3g18762.5 Bradi3g18762.5 PAC:32817490 |
High | No | 1289 | Get ORF Coding potential... Type: noncoding Potential: -0.876 Folding energies... MFEI: -29.185 AMFE: -0.570 GC content %: 51.202 | |
Bdistachyon_Bradi3g18762.6 Bradi3g18762.6 PAC:32817491 |
High | No | 1226 | Get ORF Coding potential... Type: noncoding Potential: -1.124 Folding energies... MFEI: -29.470 AMFE: -0.562 GC content %: 52.447 |