Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi3g20858 Bradi3g20858 |
Bd3 | 19861524 | 19863254 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi3g20858.1 Bradi3g20858.1 PAC:32820086 |
High | No | 731 | Get ORF Coding potential... Type: noncoding Potential: -1.089 Folding energies... MFEI: -29.097 AMFE: -0.652 GC content %: 44.596 | |
Bdistachyon_Bradi3g20858.2 Bradi3g20858.2 PAC:32820087 |
High | No | 707 | Get ORF Coding potential... Type: noncoding Potential: -1.078 Folding energies... MFEI: -28.685 AMFE: -0.650 GC content %: 44.130 | |
Bdistachyon_Bradi3g20858.3 Bradi3g20858.3 PAC:32820088 |
High | No | 728 | Get ORF Coding potential... Type: noncoding Potential: -1.088 Folding energies... MFEI: -28.874 AMFE: -0.649 GC content %: 44.505 |