Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi3g35781 Bradi3g35781 |
Bd3 | 37789498 | 37792008 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi3g35781.2 Bradi3g35781.2 PAC:32817651 |
High | No | 970 | Get ORF Coding potential... Type: noncoding Potential: -0.729 Folding energies... MFEI: -34.165 AMFE: -0.689 GC content %: 49.588 | |
Bdistachyon_Bradi3g35781.3 Bradi3g35781.3 PAC:32817652 |
High | No | 980 | Get ORF Coding potential... Type: noncoding Potential: -0.777 Folding energies... MFEI: -33.969 AMFE: -0.686 GC content %: 49.490 |