Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi3g47371 Bradi3g47371 |
Bd3 | 48763273 | 48772947 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi3g47371.1 Bradi3g47371.1 PAC:32812598 |
High | No | 1506 | Get ORF Coding potential... Type: noncoding Potential: -1.162 Folding energies... MFEI: -26.487 AMFE: -0.547 GC content %: 48.406 | |
Bdistachyon_Bradi3g47371.2 Bradi3g47371.2 PAC:32812600 |
High | No | 1449 | Get ORF Coding potential... Type: noncoding Potential: -1.159 Folding energies... MFEI: -26.204 AMFE: -0.538 GC content %: 48.723 | |
Bdistachyon_Bradi3g47371.3 Bradi3g47371.3 PAC:32812599 |
High | No | 1333 | Get ORF Coding potential... Type: noncoding Potential: -1.134 Folding energies... MFEI: -26.812 AMFE: -0.533 GC content %: 50.263 |