Gene

Bdistachyon Bradi3g50435

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Bdistachyon_Bradi3g50435
Bradi3g50435
Bd3 51412128 51413216 Phytozome v3.1 Brachypodium_distachyon
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Bdistachyon_Bradi3g50435.1
Bradi3g50435.1
PAC:32822982
High No 391
Coding potential...
Type: noncoding Potential: -0.827
Folding energies...
MFEI: -28.130 AMFE: -0.601
GC content
%: 46.803


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bradi3g50435.png