Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi4g27421 Bradi4g27421 |
Bd4 | 32454126 | 32459590 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi4g27421.2 Bradi4g27421.2 PAC:32787527 |
High | No | 2192 | Get ORF Coding potential... Type: noncoding Potential: -1.066 Folding energies... MFEI: -30.283 AMFE: -0.655 GC content %: 46.259 | |
Bdistachyon_Bradi4g27421.3 Bradi4g27421.3 PAC:32787528 |
High | No | 2022 | Get ORF Coding potential... Type: noncoding Potential: -1.058 Folding energies... MFEI: -30.959 AMFE: -0.653 GC content %: 47.428 | |
Bdistachyon_Bradi4g27421.4 Bradi4g27421.4 PAC:32787529 |
High | No | 2110 | Get ORF Coding potential... Type: noncoding Potential: -1.062 Folding energies... MFEI: -31.303 AMFE: -0.673 GC content %: 46.493 |