Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Bdistachyon_Bradi4g42112 Bradi4g42112 |
Bd4 | 46128142 | 46128649 | Phytozome | v3.1 | Brachypodium_distachyon | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Bdistachyon_Bradi4g42112.1 Bradi4g42112.1 PAC:32788181 |
High | No | 479 | Get ORF Coding potential... Type: noncoding Potential: -1.161 Folding energies... MFEI: -23.382 AMFE: -0.563 GC content %: 41.545 | |
Bdistachyon_Bradi4g42112.2 Bradi4g42112.2 PAC:32788182 |
High | No | 405 | Get ORF Coding potential... Type: noncoding Potential: -1.020 Folding energies... MFEI: -23.778 AMFE: -0.584 GC content %: 40.741 |