Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
BrapaFPsc_Brara.C04670 Brara.C04670 |
A03 | 24971900 | 24972863 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
BrapaFPsc_Brara.C04670.1 Brara.C04670.1 PAC:30619497 |
High | No | 821 | Get ORF Coding potential... Type: noncoding Potential: -1.113 Folding energies... MFEI: -21.340 AMFE: -0.544 GC content %: 39.220 | |
BrapaFPsc_Brara.C04670.2 Brara.C04670.2 PAC:30619498 |
High | No | 815 | Get ORF Coding potential... Type: noncoding Potential: -1.098 Folding energies... MFEI: -21.166 AMFE: -0.542 GC content %: 39.018 |