Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
BrapaFPsc_Brara.H01328 Brara.H01328 |
A08 | 14443177 | 14445690 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
BrapaFPsc_Brara.H01328.1 Brara.H01328.1 PAC:30649012 |
Low | Yes | 832 | Get ORF Coding potential... Type: noncoding Potential: -1.034 Folding energies... MFEI: -22.320 AMFE: -0.613 GC content %: 36.418 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
BrapaFPsc_Brara.H01328.1 | Rfam | 11.0 | mir-156 | 1.3e-14 |